ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0005198 | structural molecule activity | 10.42% (5/48) | 3.51 | 7.4e-05 | 0.001148 |
GO:0043603 | amide metabolic process | 10.42% (5/48) | 3.58 | 5.9e-05 | 0.001153 |
GO:1901566 | organonitrogen compound biosynthetic process | 12.5% (6/48) | 3.16 | 5.2e-05 | 0.001161 |
GO:0043228 | non-membrane-bounded organelle | 10.42% (5/48) | 3.44 | 9.6e-05 | 0.00124 |
GO:0043232 | intracellular non-membrane-bounded organelle | 10.42% (5/48) | 3.44 | 9.6e-05 | 0.00124 |
GO:0044237 | cellular metabolic process | 25.0% (12/48) | 1.86 | 7.2e-05 | 0.001241 |
GO:0043604 | amide biosynthetic process | 10.42% (5/48) | 3.62 | 5.2e-05 | 0.001332 |
GO:0006518 | peptide metabolic process | 10.42% (5/48) | 3.63 | 5e-05 | 0.001553 |
GO:0043043 | peptide biosynthetic process | 10.42% (5/48) | 3.66 | 4.6e-05 | 0.001777 |
GO:0003735 | structural constituent of ribosome | 10.42% (5/48) | 3.68 | 4.3e-05 | 0.002231 |
GO:0006412 | translation | 10.42% (5/48) | 3.7 | 4.1e-05 | 0.003149 |
GO:0009059 | macromolecule biosynthetic process | 10.42% (5/48) | 2.97 | 0.000427 | 0.005097 |
GO:0044249 | cellular biosynthetic process | 12.5% (6/48) | 2.53 | 0.000562 | 0.005122 |
GO:0006082 | organic acid metabolic process | 8.33% (4/48) | 3.41 | 0.000537 | 0.005201 |
GO:0019752 | carboxylic acid metabolic process | 8.33% (4/48) | 3.42 | 0.000524 | 0.005412 |
GO:0043436 | oxoacid metabolic process | 8.33% (4/48) | 3.42 | 0.000524 | 0.005412 |
GO:0005840 | ribosome | 10.42% (5/48) | 3.71 | 3.9e-05 | 0.006108 |
GO:1901564 | organonitrogen compound metabolic process | 18.75% (9/48) | 1.79 | 0.000988 | 0.007293 |
GO:1901576 | organic substance biosynthetic process | 12.5% (6/48) | 2.38 | 0.000955 | 0.007401 |
GO:0044271 | cellular nitrogen compound biosynthetic process | 10.42% (5/48) | 2.67 | 0.001082 | 0.007621 |
GO:0043226 | organelle | 10.42% (5/48) | 2.72 | 0.000951 | 0.007762 |
GO:0043229 | intracellular organelle | 10.42% (5/48) | 2.72 | 0.000938 | 0.008075 |
GO:0009058 | biosynthetic process | 12.5% (6/48) | 2.23 | 0.001676 | 0.01039 |
GO:0009987 | cellular process | 27.08% (13/48) | 1.3 | 0.001621 | 0.010472 |
GO:0071704 | organic substance metabolic process | 25.0% (12/48) | 1.38 | 0.001585 | 0.010679 |
GO:0006807 | nitrogen compound metabolic process | 20.83% (10/48) | 1.51 | 0.002178 | 0.012982 |
GO:0044281 | small molecule metabolic process | 8.33% (4/48) | 2.71 | 0.003204 | 0.018393 |
GO:0044238 | primary metabolic process | 22.92% (11/48) | 1.33 | 0.003377 | 0.018694 |
GO:0008152 | metabolic process | 25.0% (12/48) | 1.24 | 0.003515 | 0.018787 |
GO:1901605 | alpha-amino acid metabolic process | 4.17% (2/48) | 4.45 | 0.00377 | 0.019478 |
GO:0019538 | protein metabolic process | 14.58% (7/48) | 1.77 | 0.004106 | 0.020528 |
GO:0005484 | SNAP receptor activity | 2.08% (1/48) | 7.66 | 0.004937 | 0.021257 |
GO:0004451 | isocitrate lyase activity | 2.08% (1/48) | 7.66 | 0.004937 | 0.021257 |
GO:0030674 | protein-macromolecule adaptor activity | 2.08% (1/48) | 7.66 | 0.004937 | 0.021257 |
GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | 2.08% (1/48) | 7.66 | 0.004937 | 0.021257 |
GO:0016833 | oxo-acid-lyase activity | 2.08% (1/48) | 7.66 | 0.004937 | 0.021257 |
GO:0034641 | cellular nitrogen compound metabolic process | 12.5% (6/48) | 1.9 | 0.005101 | 0.021367 |
GO:0019346 | transsulfuration | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0009085 | lysine biosynthetic process | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0046451 | diaminopimelate metabolic process | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0006553 | lysine metabolic process | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0009089 | lysine biosynthetic process via diaminopimelate | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0050667 | homocysteine metabolic process | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0060090 | molecular adaptor activity | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0009092 | homoserine metabolic process | 2.08% (1/48) | 7.08 | 0.007397 | 0.025478 |
GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | 2.08% (1/48) | 6.66 | 0.00985 | 0.033191 |
GO:0043170 | macromolecule metabolic process | 16.67% (8/48) | 1.38 | 0.010721 | 0.035355 |
GO:0006534 | cysteine metabolic process | 2.08% (1/48) | 6.08 | 0.01474 | 0.043936 |
GO:0004525 | ribonuclease III activity | 2.08% (1/48) | 6.08 | 0.01474 | 0.043936 |
GO:0032296 | double-stranded RNA-specific ribonuclease activity | 2.08% (1/48) | 6.08 | 0.01474 | 0.043936 |
GO:0009067 | aspartate family amino acid biosynthetic process | 2.08% (1/48) | 6.08 | 0.01474 | 0.043936 |
GO:0043648 | dicarboxylic acid metabolic process | 2.08% (1/48) | 6.08 | 0.01474 | 0.043936 |
GO:0009069 | serine family amino acid metabolic process | 2.08% (1/48) | 5.85 | 0.017176 | 0.048404 |
GO:0003872 | 6-phosphofructokinase activity | 2.08% (1/48) | 5.85 | 0.017176 | 0.048404 |
GO:0009066 | aspartate family amino acid metabolic process | 2.08% (1/48) | 5.85 | 0.017176 | 0.048404 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_20 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_96 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_239 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_265 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_279 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_28 | 0.012 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_98 | 0.016 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_130 | 0.033 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_167 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_33 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_50 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_58 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_60 | 0.015 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_84 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_106 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_116 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_129 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_150 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |