Coexpression cluster: Cluster_84 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006378 mRNA polyadenylation 1.8% (2/111) 7.45 3.2e-05 0.00221
GO:0005849 mRNA cleavage factor complex 1.8% (2/111) 7.45 3.2e-05 0.00221
GO:0003676 nucleic acid binding 13.51% (15/111) 1.84 1.8e-05 0.002454
GO:0005575 cellular_component 18.02% (20/111) 1.55 1.3e-05 0.003565
GO:0003674 molecular_function 47.75% (53/111) 0.58 0.000367 0.00834
GO:1901363 heterocyclic compound binding 21.62% (24/111) 1.07 0.000322 0.008794
GO:0097159 organic cyclic compound binding 21.62% (24/111) 1.07 0.000322 0.008794
GO:0003723 RNA binding 5.41% (6/111) 2.68 0.000361 0.008952
GO:0031123 RNA 3'-end processing 1.8% (2/111) 5.87 0.000478 0.010046
GO:0031124 mRNA 3'-end processing 1.8% (2/111) 6.45 0.000193 0.010526
GO:0005852 eukaryotic translation initiation factor 3 complex 1.8% (2/111) 6.13 0.00032 0.010924
GO:0003729 mRNA binding 1.8% (2/111) 6.13 0.00032 0.010924
GO:0005488 binding 32.43% (36/111) 0.82 0.000251 0.011426
GO:0032991 protein-containing complex 7.21% (8/111) 2.02 0.00081 0.01475
GO:0006397 mRNA processing 2.7% (3/111) 4.04 0.000799 0.015576
GO:0016071 mRNA metabolic process 2.7% (3/111) 3.83 0.001226 0.020911
GO:0005634 nucleus 3.6% (4/111) 2.9 0.002076 0.028341
GO:0110165 cellular anatomical entity 11.71% (13/111) 1.32 0.002071 0.02976
GO:0043226 organelle 6.31% (7/111) 1.99 0.001963 0.029768
GO:0043229 intracellular organelle 6.31% (7/111) 2.0 0.001927 0.030946
GO:0035592 establishment of protein localization to extracellular region 0.9% (1/111) 7.45 0.005715 0.04876
GO:0006220 pyrimidine nucleotide metabolic process 0.9% (1/111) 7.45 0.005715 0.04876
GO:0009317 acetyl-CoA carboxylase complex 0.9% (1/111) 7.45 0.005715 0.04876
GO:0009306 protein secretion 0.9% (1/111) 7.45 0.005715 0.04876
GO:0006221 pyrimidine nucleotide biosynthetic process 0.9% (1/111) 7.45 0.005715 0.04876
GO:0031369 translation initiation factor binding 0.9% (1/111) 7.45 0.005715 0.04876
GO:0071692 protein localization to extracellular region 0.9% (1/111) 7.45 0.005715 0.04876
GO:0003883 CTP synthase activity 0.9% (1/111) 7.45 0.005715 0.04876
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_13 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_130 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_150 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_168 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_169 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_177 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (111) (download table)

InterPro Domains

GO Terms

Family Terms