Coexpression cluster: Cluster_104 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 24.56% (14/57) 7.13 0.0 0.0
GO:0015979 photosynthesis 24.56% (14/57) 6.93 0.0 0.0
GO:0098796 membrane protein complex 26.32% (15/57) 5.46 0.0 0.0
GO:0009522 photosystem I 14.04% (8/57) 8.09 0.0 0.0
GO:0032991 protein-containing complex 26.32% (15/57) 3.89 0.0 0.0
GO:0009538 photosystem I reaction center 8.77% (5/57) 8.41 0.0 0.0
GO:0009523 photosystem II 10.53% (6/57) 6.47 0.0 0.0
GO:0044237 cellular metabolic process 35.09% (20/57) 2.35 0.0 0.0
GO:0009987 cellular process 38.6% (22/57) 1.81 0.0 1e-06
GO:0008152 metabolic process 36.84% (21/57) 1.8 0.0 2e-06
GO:0009654 photosystem II oxygen evolving complex 7.02% (4/57) 6.24 0.0 3e-06
GO:1990204 oxidoreductase complex 7.02% (4/57) 5.66 1e-06 1.3e-05
GO:0005575 cellular_component 26.32% (15/57) 2.1 1e-06 1.3e-05
GO:0019898 extrinsic component of membrane 5.26% (3/57) 6.19 9e-06 8e-05
GO:0033014 tetrapyrrole biosynthetic process 5.26% (3/57) 6.19 9e-06 8e-05
GO:0033013 tetrapyrrole metabolic process 5.26% (3/57) 5.68 2.6e-05 0.000231
GO:0008150 biological_process 40.35% (23/57) 1.21 4e-05 0.000328
GO:0010207 photosystem II assembly 3.51% (2/57) 7.41 5.1e-05 0.000393
GO:0022607 cellular component assembly 5.26% (3/57) 4.38 0.000401 0.002809
GO:1902494 catalytic complex 7.02% (4/57) 3.54 0.000386 0.002846
GO:0019438 aromatic compound biosynthetic process 7.02% (4/57) 3.18 0.000983 0.006551
GO:0018130 heterocycle biosynthetic process 7.02% (4/57) 3.14 0.00111 0.007062
GO:1901362 organic cyclic compound biosynthetic process 7.02% (4/57) 3.01 0.001526 0.009292
GO:0043467 regulation of generation of precursor metabolites and energy 1.75% (1/57) 8.41 0.002935 0.012451
GO:0010109 regulation of photosynthesis 1.75% (1/57) 8.41 0.002935 0.012451
GO:0010242 oxygen evolving activity 1.75% (1/57) 8.41 0.002935 0.012451
GO:0042548 regulation of photosynthesis, light reaction 1.75% (1/57) 8.41 0.002935 0.012451
GO:0004655 porphobilinogen synthase activity 1.75% (1/57) 8.41 0.002935 0.012451
GO:0042549 photosystem II stabilization 1.75% (1/57) 8.41 0.002935 0.012451
GO:0004418 hydroxymethylbilane synthase activity 1.75% (1/57) 8.41 0.002935 0.012451
GO:0005509 calcium ion binding 5.26% (3/57) 3.51 0.00235 0.012655
GO:0043169 cation binding 12.28% (7/57) 1.93 0.002304 0.012904
GO:0046872 metal ion binding 12.28% (7/57) 1.94 0.002223 0.012967
GO:0065003 protein-containing complex assembly 3.51% (2/57) 4.28 0.004732 0.019485
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity 1.75% (1/57) 7.41 0.005861 0.021595
GO:0016744 transketolase or transaldolase activity 1.75% (1/57) 7.41 0.005861 0.021595
GO:0016987 sigma factor activity 1.75% (1/57) 7.41 0.005861 0.021595
GO:0004109 coproporphyrinogen oxidase activity 1.75% (1/57) 7.41 0.005861 0.021595
GO:0016043 cellular component organization 5.26% (3/57) 2.98 0.006589 0.023655
GO:0043933 protein-containing complex organization 3.51% (2/57) 3.92 0.007727 0.026386
GO:0044249 cellular biosynthetic process 8.77% (5/57) 2.02 0.007693 0.026925
GO:0006721 terpenoid metabolic process 1.75% (1/57) 6.41 0.011689 0.037193
GO:0016114 terpenoid biosynthetic process 1.75% (1/57) 6.41 0.011689 0.037193
GO:0071840 cellular component organization or biogenesis 5.26% (3/57) 2.66 0.011995 0.037317
GO:1901576 organic substance biosynthetic process 8.77% (5/57) 1.87 0.011614 0.038715
GO:0009536 plastid 1.75% (1/57) 6.09 0.01459 0.041687
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.75% (1/57) 6.09 0.01459 0.041687
GO:0009507 chloroplast 1.75% (1/57) 6.09 0.01459 0.041687
GO:0044271 cellular nitrogen compound biosynthetic process 7.02% (4/57) 2.1 0.013964 0.0425
GO:0110165 cellular anatomical entity 12.28% (7/57) 1.39 0.016671 0.046678
GO:0009058 biosynthetic process 8.77% (5/57) 1.71 0.017903 0.049146
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_123 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_187 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_237 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_13 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_147 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_6 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_141 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_146 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms