Coexpression cluster: Cluster_104 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 43.75% (21/48) 5.23 0.0 0.0
GO:0005840 ribosome 37.5% (18/48) 5.65 0.0 0.0
GO:0003735 structural constituent of ribosome 37.5% (18/48) 5.59 0.0 0.0
GO:0005198 structural molecule activity 37.5% (18/48) 5.51 0.0 0.0
GO:0043228 non-membrane-bounded organelle 37.5% (18/48) 5.47 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 37.5% (18/48) 5.47 0.0 0.0
GO:0006412 translation 35.42% (17/48) 5.53 0.0 0.0
GO:0044249 cellular biosynthetic process 43.75% (21/48) 4.58 0.0 0.0
GO:0043043 peptide biosynthetic process 35.42% (17/48) 5.5 0.0 0.0
GO:0043604 amide biosynthetic process 35.42% (17/48) 5.46 0.0 0.0
GO:0006518 peptide metabolic process 35.42% (17/48) 5.44 0.0 0.0
GO:0043603 amide metabolic process 35.42% (17/48) 5.37 0.0 0.0
GO:1901576 organic substance biosynthetic process 43.75% (21/48) 4.44 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 39.58% (19/48) 4.81 0.0 0.0
GO:0009058 biosynthetic process 43.75% (21/48) 4.28 0.0 0.0
GO:0043229 intracellular organelle 37.5% (18/48) 4.8 0.0 0.0
GO:0043226 organelle 37.5% (18/48) 4.8 0.0 0.0
GO:0009059 macromolecule biosynthetic process 35.42% (17/48) 4.86 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 50.0% (24/48) 3.14 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 39.58% (19/48) 3.68 0.0 0.0
GO:0006807 nitrogen compound metabolic process 50.0% (24/48) 2.73 0.0 0.0
GO:0110165 cellular anatomical entity 41.67% (20/48) 3.15 0.0 0.0
GO:0005575 cellular_component 43.75% (21/48) 2.98 0.0 0.0
GO:0019538 protein metabolic process 41.67% (20/48) 3.09 0.0 0.0
GO:0044237 cellular metabolic process 43.75% (21/48) 2.77 0.0 0.0
GO:0071704 organic substance metabolic process 50.0% (24/48) 2.43 0.0 0.0
GO:0008152 metabolic process 50.0% (24/48) 2.33 0.0 0.0
GO:0009987 cellular process 47.92% (23/48) 2.3 0.0 0.0
GO:0043170 macromolecule metabolic process 41.67% (20/48) 2.58 0.0 0.0
GO:0044238 primary metabolic process 45.83% (22/48) 2.36 0.0 0.0
GO:0008150 biological_process 54.17% (26/48) 1.81 0.0 0.0
GO:0003674 molecular_function 62.5% (30/48) 1.08 2e-06 9e-06
GO:0044283 small molecule biosynthetic process 6.25% (3/48) 4.6 0.000264 0.001065
GO:0003723 RNA binding 10.42% (5/48) 3.11 0.00028 0.001094
GO:0019843 rRNA binding 4.17% (2/48) 6.05 0.000421 0.0016
GO:0000413 protein peptidyl-prolyl isomerization 4.17% (2/48) 5.75 0.000637 0.002289
GO:0018208 peptidyl-proline modification 4.17% (2/48) 5.75 0.000637 0.002289
GO:0008652 amino acid biosynthetic process 4.17% (2/48) 5.26 0.001263 0.004422
GO:0018193 peptidyl-amino acid modification 4.17% (2/48) 5.11 0.001542 0.005258
GO:0016859 cis-trans isomerase activity 4.17% (2/48) 4.89 0.002093 0.00679
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 4.17% (2/48) 4.89 0.002093 0.00679
GO:0004853 uroporphyrinogen decarboxylase activity 2.08% (1/48) 8.5 0.002751 0.008315
GO:0009349 riboflavin synthase complex 2.08% (1/48) 8.5 0.002751 0.008315
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 2.08% (1/48) 8.5 0.002751 0.008315
GO:0006553 lysine metabolic process 2.08% (1/48) 7.92 0.004123 0.010968
GO:0009085 lysine biosynthetic process 2.08% (1/48) 7.92 0.004123 0.010968
GO:0009089 lysine biosynthetic process via diaminopimelate 2.08% (1/48) 7.92 0.004123 0.010968
GO:0046451 diaminopimelate metabolic process 2.08% (1/48) 7.92 0.004123 0.010968
GO:0046394 carboxylic acid biosynthetic process 4.17% (2/48) 4.44 0.003874 0.011201
GO:0016053 organic acid biosynthetic process 4.17% (2/48) 4.44 0.003874 0.011201
GO:0071586 CAAX-box protein processing 2.08% (1/48) 7.18 0.006863 0.017898
GO:0070727 cellular macromolecule localization 4.17% (2/48) 3.82 0.008919 0.020811
GO:0033036 macromolecule localization 4.17% (2/48) 3.82 0.008919 0.020811
GO:0045184 establishment of protein localization 4.17% (2/48) 3.82 0.008919 0.020811
GO:0008104 protein localization 4.17% (2/48) 3.82 0.008919 0.020811
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 2.08% (1/48) 6.92 0.00823 0.02105
GO:0015031 protein transport 4.17% (2/48) 3.86 0.008426 0.021146
GO:0044281 small molecule metabolic process 6.25% (3/48) 2.77 0.009677 0.021815
GO:0006779 porphyrin-containing compound biosynthetic process 2.08% (1/48) 6.7 0.009596 0.022004
GO:0006771 riboflavin metabolic process 2.08% (1/48) 6.5 0.010959 0.023136
GO:0009231 riboflavin biosynthetic process 2.08% (1/48) 6.5 0.010959 0.023136
GO:0042726 flavin-containing compound metabolic process 2.08% (1/48) 6.5 0.010959 0.023136
GO:0042727 flavin-containing compound biosynthetic process 2.08% (1/48) 6.5 0.010959 0.023136
GO:0006520 amino acid metabolic process 4.17% (2/48) 3.57 0.012326 0.025616
GO:0016853 isomerase activity 4.17% (2/48) 3.55 0.012713 0.026013
GO:0043648 dicarboxylic acid metabolic process 2.08% (1/48) 6.18 0.01368 0.026757
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 2.08% (1/48) 6.18 0.01368 0.026757
GO:0071705 nitrogen compound transport 4.17% (2/48) 3.5 0.013503 0.027211
GO:0051641 cellular localization 4.17% (2/48) 3.36 0.01643 0.03035
GO:0009067 aspartate family amino acid biosynthetic process 2.08% (1/48) 5.92 0.016394 0.03071
GO:0033014 tetrapyrrole biosynthetic process 2.08% (1/48) 5.92 0.016394 0.03071
GO:0006778 porphyrin-containing compound metabolic process 2.08% (1/48) 5.92 0.016394 0.03071
GO:0071702 organic substance transport 4.17% (2/48) 3.29 0.017986 0.03277
GO:0006767 water-soluble vitamin metabolic process 2.08% (1/48) 5.6 0.020452 0.034872
GO:0009110 vitamin biosynthetic process 2.08% (1/48) 5.6 0.020452 0.034872
GO:0006766 vitamin metabolic process 2.08% (1/48) 5.6 0.020452 0.034872
GO:0042364 water-soluble vitamin biosynthetic process 2.08% (1/48) 5.6 0.020452 0.034872
GO:0009066 aspartate family amino acid metabolic process 2.08% (1/48) 5.6 0.020452 0.034872
GO:0016485 protein processing 2.08% (1/48) 5.5 0.0218 0.035796
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.08% (1/48) 5.5 0.0218 0.035796
GO:0016831 carboxy-lyase activity 2.08% (1/48) 5.5 0.0218 0.035796
GO:0033013 tetrapyrrole metabolic process 2.08% (1/48) 5.42 0.023147 0.037544
GO:0016491 oxidoreductase activity 8.33% (4/48) 1.86 0.0243 0.038938
GO:0051604 protein maturation 2.08% (1/48) 5.26 0.025836 0.040906
GO:0006082 organic acid metabolic process 4.17% (2/48) 2.9 0.02965 0.045327
GO:0019752 carboxylic acid metabolic process 4.17% (2/48) 2.91 0.029371 0.045423
GO:0043436 oxoacid metabolic process 4.17% (2/48) 2.91 0.029371 0.045423
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 2.08% (1/48) 4.98 0.031191 0.047141
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_159 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_2 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_36 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_65 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_66 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_81 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_91 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_92 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_96 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_123 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_126 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_157 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_173 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_198 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_210 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_392 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_394 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_677 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_120 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (48) (download table)

InterPro Domains

GO Terms

Family Terms