Coexpression cluster: Cluster_198 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006754 ATP biosynthetic process 18.37% (9/49) 7.16 0.0 0.0
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 18.37% (9/49) 7.16 0.0 0.0
GO:0009142 nucleoside triphosphate biosynthetic process 18.37% (9/49) 7.16 0.0 0.0
GO:0009145 purine nucleoside triphosphate biosynthetic process 18.37% (9/49) 7.16 0.0 0.0
GO:0009201 ribonucleoside triphosphate biosynthetic process 18.37% (9/49) 7.16 0.0 0.0
GO:0015986 proton motive force-driven ATP synthesis 18.37% (9/49) 7.22 0.0 0.0
GO:0009144 purine nucleoside triphosphate metabolic process 18.37% (9/49) 6.8 0.0 0.0
GO:0009205 purine ribonucleoside triphosphate metabolic process 18.37% (9/49) 6.8 0.0 0.0
GO:0009199 ribonucleoside triphosphate metabolic process 18.37% (9/49) 6.8 0.0 0.0
GO:0046034 ATP metabolic process 18.37% (9/49) 6.8 0.0 0.0
GO:0009141 nucleoside triphosphate metabolic process 18.37% (9/49) 6.72 0.0 0.0
GO:0009260 ribonucleotide biosynthetic process 18.37% (9/49) 6.63 0.0 0.0
GO:0046390 ribose phosphate biosynthetic process 18.37% (9/49) 6.63 0.0 0.0
GO:0009152 purine ribonucleotide biosynthetic process 18.37% (9/49) 6.63 0.0 0.0
GO:0006164 purine nucleotide biosynthetic process 18.37% (9/49) 6.45 0.0 0.0
GO:0072522 purine-containing compound biosynthetic process 18.37% (9/49) 6.43 0.0 0.0
GO:1901293 nucleoside phosphate biosynthetic process 18.37% (9/49) 6.19 0.0 0.0
GO:0009165 nucleotide biosynthetic process 18.37% (9/49) 6.19 0.0 0.0
GO:0009259 ribonucleotide metabolic process 18.37% (9/49) 6.14 0.0 0.0
GO:0019693 ribose phosphate metabolic process 18.37% (9/49) 6.14 0.0 0.0
GO:0009150 purine ribonucleotide metabolic process 18.37% (9/49) 6.14 0.0 0.0
GO:1901137 carbohydrate derivative biosynthetic process 18.37% (9/49) 6.03 0.0 0.0
GO:0006163 purine nucleotide metabolic process 18.37% (9/49) 5.97 0.0 0.0
GO:0072521 purine-containing compound metabolic process 18.37% (9/49) 5.96 0.0 0.0
GO:0009117 nucleotide metabolic process 18.37% (9/49) 5.78 0.0 0.0
GO:0006753 nucleoside phosphate metabolic process 18.37% (9/49) 5.74 0.0 0.0
GO:0055086 nucleobase-containing small molecule metabolic process 18.37% (9/49) 5.64 0.0 0.0
GO:0090407 organophosphate biosynthetic process 18.37% (9/49) 5.5 0.0 0.0
GO:1901135 carbohydrate derivative metabolic process 18.37% (9/49) 5.37 0.0 0.0
GO:0019637 organophosphate metabolic process 18.37% (9/49) 5.05 0.0 0.0
GO:0034654 nucleobase-containing compound biosynthetic process 18.37% (9/49) 4.75 0.0 0.0
GO:0098796 membrane protein complex 18.37% (9/49) 4.56 0.0 0.0
GO:0019438 aromatic compound biosynthetic process 18.37% (9/49) 4.5 0.0 0.0
GO:0018130 heterocycle biosynthetic process 18.37% (9/49) 4.47 0.0 0.0
GO:0009521 photosystem 12.24% (6/49) 6.11 0.0 0.0
GO:0009523 photosystem II 10.2% (5/49) 6.91 0.0 0.0
GO:1901362 organic cyclic compound biosynthetic process 18.37% (9/49) 4.31 0.0 0.0
GO:0019684 photosynthesis, light reaction 10.2% (5/49) 6.79 0.0 0.0
GO:0009767 photosynthetic electron transport chain 10.2% (5/49) 6.75 0.0 0.0
GO:0015977 carbon fixation 8.16% (4/49) 7.73 0.0 0.0
GO:0016984 ribulose-bisphosphate carboxylase activity 8.16% (4/49) 7.55 0.0 0.0
GO:0022900 electron transport chain 10.2% (5/49) 6.23 0.0 0.0
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 8.16% (4/49) 7.39 0.0 0.0
GO:0009772 photosynthetic electron transport in photosystem II 8.16% (4/49) 7.39 0.0 0.0
GO:0008152 metabolic process 46.94% (23/49) 1.83 0.0 0.0
GO:0044237 cellular metabolic process 38.78% (19/49) 2.11 0.0 0.0
GO:0044281 small molecule metabolic process 18.37% (9/49) 3.76 0.0 0.0
GO:1902600 proton transmembrane transport 10.2% (5/49) 5.71 0.0 0.0
GO:0015979 photosynthesis 10.2% (5/49) 5.67 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 18.37% (9/49) 3.58 0.0 0.0
GO:0032991 protein-containing complex 18.37% (9/49) 3.44 0.0 0.0
GO:0016831 carboxy-lyase activity 8.16% (4/49) 6.35 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 18.37% (9/49) 3.37 0.0 1e-06
GO:0098655 monoatomic cation transmembrane transport 10.2% (5/49) 5.23 0.0 1e-06
GO:0034220 monoatomic ion transmembrane transport 10.2% (5/49) 5.21 0.0 1e-06
GO:0006091 generation of precursor metabolites and energy 10.2% (5/49) 5.2 0.0 1e-06
GO:0098662 inorganic cation transmembrane transport 10.2% (5/49) 5.1 0.0 1e-06
GO:0006139 nucleobase-containing compound metabolic process 18.37% (9/49) 3.23 0.0 1e-06
GO:0098660 inorganic ion transmembrane transport 10.2% (5/49) 5.02 0.0 1e-06
GO:0006725 cellular aromatic compound metabolic process 18.37% (9/49) 3.1 1e-06 2e-06
GO:0046483 heterocycle metabolic process 18.37% (9/49) 3.1 1e-06 2e-06
GO:1901360 organic cyclic compound metabolic process 18.37% (9/49) 3.04 1e-06 3e-06
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 6.12% (3/49) 7.13 1e-06 3e-06
GO:0016830 carbon-carbon lyase activity 8.16% (4/49) 5.61 1e-06 3e-06
GO:0044249 cellular biosynthetic process 18.37% (9/49) 2.91 3e-06 6e-06
GO:0006812 monoatomic cation transport 10.2% (5/49) 4.3 6e-06 1.3e-05
GO:1901576 organic substance biosynthetic process 18.37% (9/49) 2.76 6e-06 1.3e-05
GO:0009058 biosynthetic process 18.37% (9/49) 2.61 1.4e-05 3e-05
GO:0009987 cellular process 38.78% (19/49) 1.48 1.4e-05 3e-05
GO:0034641 cellular nitrogen compound metabolic process 18.37% (9/49) 2.58 1.6e-05 3.3e-05
GO:0009055 electron transfer activity 8.16% (4/49) 4.68 1.9e-05 3.8e-05
GO:0006811 monoatomic ion transport 10.2% (5/49) 3.92 2e-05 4.1e-05
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 6.12% (3/49) 5.73 2.6e-05 5.1e-05
GO:0008150 biological_process 46.94% (23/49) 1.11 8.2e-05 0.000162
GO:0016829 lyase activity 8.16% (4/49) 3.98 0.000122 0.000238
GO:0015078 proton transmembrane transporter activity 6.12% (3/49) 4.73 0.000204 0.000392
GO:0000287 magnesium ion binding 6.12% (3/49) 4.41 0.000388 0.000736
GO:0006793 phosphorus metabolic process 18.37% (9/49) 1.94 0.00046 0.000851
GO:0006796 phosphate-containing compound metabolic process 18.37% (9/49) 1.94 0.00046 0.000851
GO:0046872 metal ion binding 16.33% (8/49) 1.97 0.000891 0.001626
GO:0043169 cation binding 16.33% (8/49) 1.96 0.000919 0.001657
GO:0022890 inorganic cation transmembrane transporter activity 6.12% (3/49) 3.58 0.002042 0.003635
GO:0008324 monoatomic cation transmembrane transporter activity 6.12% (3/49) 3.52 0.002283 0.004016
GO:0015318 inorganic molecular entity transmembrane transporter activity 6.12% (3/49) 3.42 0.002818 0.00484
GO:0043167 ion binding 26.53% (13/49) 1.21 0.002786 0.004842
GO:0055085 transmembrane transport 10.2% (5/49) 2.3 0.003419 0.005804
GO:0071704 organic substance metabolic process 26.53% (13/49) 1.12 0.005034 0.008448
GO:0015075 monoatomic ion transmembrane transporter activity 6.12% (3/49) 3.01 0.006144 0.010193
GO:0002161 aminoacyl-tRNA editing activity 2.04% (1/49) 7.05 0.007533 0.012357
GO:0005575 cellular_component 18.37% (9/49) 1.22 0.013381 0.021706
GO:0016020 membrane 12.24% (6/49) 1.51 0.018003 0.028883
GO:1901564 organonitrogen compound metabolic process 18.37% (9/49) 1.14 0.018692 0.029663
GO:0016168 chlorophyll binding 2.04% (1/49) 5.55 0.021198 0.033279
GO:0006810 transport 10.2% (5/49) 1.64 0.02192 0.034045
GO:0051234 establishment of localization 10.2% (5/49) 1.63 0.022183 0.034091
GO:0051179 localization 10.2% (5/49) 1.61 0.023323 0.035471
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_48 0.028 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_3 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_13 0.042 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_15 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_17 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_32 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_37 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_39 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_56 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_64 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_73 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_99 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_101 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_117 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_140 0.056 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_143 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_157 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_173 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_246 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.098 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_24 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_33 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_40 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_153 0.031 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms