Heatmap: Cluster_198 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Lsat_1_v5_gn_0_28780.1 (ATPA)	0.72	0.71	0.92	1.03	-0.94	-1.0	0.46	-0.12	0.11	-0.03	-0.27	-0.17	-0.12	-1.95	-1.03	-0.04	0.25	0.93	0.13	0.09	0.27	-0.44	-4.64	0.16	-0.11	0.21	-0.74	0.16	-0.39	-0.58	-1.12
Lsat_1_v5_gn_0_29380.1 (AIC1)	0.11	0.2	0.57	0.77	-1.24	-1.16	0.84	0.23	0.43	0.43	-0.12	0.06	0.16	-2.53	-0.77	-0.01	0.16	0.14	-0.27	0.5	0.85	0.12	-4.3	0.25	0.14	0.0	0.0	0.24	-0.71	-1.03	-2.04
Lsat_1_v5_gn_0_47661.1	0.12	0.4	0.67	0.7	-0.72	-0.58	1.07	0.09	0.39	0.3	-0.17	-0.29	-0.25	-2.03	-0.63	-0.17	-0.03	0.59	-0.59	0.28	0.78	0.08	-3.35	0.11	-0.06	-0.09	-0.05	-0.0	-0.24	-0.7	-1.27
Lsat_1_v5_gn_1_14180.1 (PSAC)	0.35	1.02	0.86	1.21	-0.41	-0.07	0.53	0.11	-0.07	0.22	-0.46	-0.34	-0.55	-1.1	-0.35	-0.27	0.03	0.57	0.01	0.32	0.26	-0.03	-4.13	-0.22	-0.17	-0.3	-0.51	-0.12	-0.32	-0.8	-1.29
Lsat_1_v5_gn_1_27981.1 (PSBE)	-0.5	0.03	0.61	0.91	-1.52	-1.53	-0.23	-0.05	0.09	-0.04	-0.67	-1.17	-1.22	-1.7	-0.45	0.04	-0.21	2.37	0.02	0.46	0.72	0.09	-4.2	-0.11	0.04	-0.03	0.08	-0.42	-0.01	-1.07	-1.56
Lsat_1_v5_gn_1_38700.1 (ATPA)	0.72	0.71	0.92	1.03	-0.94	-1.0	0.46	-0.12	0.11	-0.03	-0.27	-0.17	-0.12	-1.95	-1.03	-0.04	0.25	0.93	0.13	0.09	0.27	-0.44	-4.64	0.16	-0.11	0.21	-0.74	0.16	-0.39	-0.58	-1.12
Lsat_1_v5_gn_1_38741.1 (PSBE)	-0.5	0.03	0.61	0.91	-1.52	-1.53	-0.23	-0.05	0.09	-0.04	-0.67	-1.17	-1.22	-1.7	-0.45	0.04	-0.21	2.37	0.02	0.46	0.72	0.09	-4.2	-0.11	0.04	-0.03	0.08	-0.42	-0.01	-1.07	-1.56
Lsat_1_v5_gn_1_88060.1 (ATPA)	0.72	0.71	0.92	1.03	-0.94	-1.0	0.46	-0.12	0.11	-0.03	-0.27	-0.17	-0.12	-1.95	-1.03	-0.04	0.25	0.93	0.13	0.09	0.27	-0.44	-4.64	0.16	-0.11	0.21	-0.74	0.16	-0.39	-0.58	-1.12
Lsat_1_v5_gn_1_88080.1 (PSBD)	0.65	0.88	1.0	1.07	-0.74	-0.98	0.07	-0.24	0.31	0.25	-0.38	-0.33	-0.48	-1.33	-0.47	0.05	-0.01	0.83	0.12	0.15	0.25	0.15	-2.63	0.01	-0.19	-0.04	-0.37	-0.44	-0.29	-0.83	-1.15
Lsat_1_v5_gn_2_1621.1 (ATPH)	0.39	0.15	0.67	0.63	-0.71	-0.9	-0.15	-0.32	-0.08	0.31	-0.63	-1.26	-0.87	-1.39	-0.66	-0.18	-0.68	2.42	-0.24	0.42	0.36	0.18	-2.31	-0.09	-0.47	0.22	-0.34	-0.53	-1.07	-0.49	-0.73
Lsat_1_v5_gn_2_1641.1 (ATPI)	-0.08	0.63	0.75	0.88	-0.33	-0.38	0.07	-0.03	-0.35	-0.23	-0.57	-1.12	-1.22	-0.9	-0.53	-0.1	-0.4	2.6	-0.26	-0.62	0.02	-0.18	-3.51	-0.45	-0.74	-0.27	-0.01	-0.47	-0.47	-0.53	-1.17
Lsat_1_v5_gn_2_20521.1 (RH10)	0.95	0.47	-	0.63	0.27	-	0.86	-0.64	0.97	0.9	0.29	0.98	1.17	-0.67	-2.5	1.34	1.73	-1.42	-	-1.21	1.27	-2.4	-2.16	-0.28	-2.75	-0.89	0.33	-	-2.71	-	-
Lsat_1_v5_gn_2_20561.1	-0.09	0.74	0.74	0.87	-0.63	-0.65	0.67	-0.44	1.19	0.39	0.77	-0.32	-0.07	-0.1	-0.27	0.82	0.8	-0.55	-0.41	-0.04	-0.12	-0.45	-3.86	-0.51	-0.24	-0.7	-0.85	-0.51	-0.67	-1.12	-1.73
Lsat_1_v5_gn_2_34800.1 (PSBC)	0.63	1.06	1.16	1.02	-0.62	-0.75	0.4	-0.46	0.34	0.16	-0.46	-0.62	-0.59	-1.73	-0.68	0.02	-0.08	0.66	0.04	0.14	0.18	0.11	-3.53	-0.1	-0.05	-0.32	-0.04	-0.12	-0.16	-0.8	-1.22
Lsat_1_v5_gn_2_43901.1 (PSBE)	-0.13	0.51	0.65	0.96	-0.99	-1.09	0.52	-0.55	0.16	0.27	0.14	-0.42	-1.22	-2.02	-0.38	0.42	0.34	1.93	0.05	0.31	0.46	0.24	-4.85	-0.3	-0.7	-0.2	-0.53	-0.3	-0.87	-0.7	-2.35
Lsat_1_v5_gn_2_50780.1 (PSBD)	0.65	0.88	1.0	1.07	-0.74	-0.98	0.07	-0.24	0.31	0.25	-0.38	-0.33	-0.48	-1.33	-0.47	0.05	-0.01	0.83	0.12	0.15	0.25	0.15	-2.63	0.01	-0.19	-0.04	-0.37	-0.44	-0.29	-0.83	-1.15
Lsat_1_v5_gn_2_50801.1 (PSBC)	0.25	0.81	1.14	1.08	-0.8	-0.58	1.48	-0.2	-0.55	-0.07	-1.35	-0.2	-1.83	-2.29	-0.17	-0.72	-0.92	1.26	-0.11	-0.14	0.11	0.05	-	-0.22	-0.43	-0.35	0.78	0.62	-0.18	-2.02	-1.61
Lsat_1_v5_gn_2_89801.1 (RBCL)	0.17	0.89	1.16	1.41	-1.57	-1.42	0.82	-0.14	-0.03	0.21	-0.64	-0.72	-1.0	-2.54	-0.92	-0.02	0.07	0.09	0.2	0.56	0.89	0.09	-3.69	0.01	-0.06	-0.06	-0.09	-0.28	-0.4	-0.83	-1.26
Lsat_1_v5_gn_2_97101.1	0.12	0.4	0.67	0.7	-0.72	-0.58	1.07	0.09	0.39	0.3	-0.17	-0.29	-0.25	-2.03	-0.63	-0.17	-0.03	0.59	-0.59	0.28	0.78	0.08	-3.35	0.11	-0.06	-0.09	-0.05	-0.0	-0.24	-0.7	-1.27
Lsat_1_v5_gn_3_117960.1 (ATPF)	0.16	0.17	0.8	0.84	-0.91	-1.87	-0.11	-0.08	-0.76	-0.09	-0.66	-0.79	-0.92	-0.91	-1.19	0.63	0.36	2.15	0.1	-0.17	0.36	-0.73	-3.1	0.34	-0.08	0.17	-0.3	-0.13	-0.61	-0.24	-0.93
Lsat_1_v5_gn_3_139841.1 (CURT1A)	-2.65	0.51	0.49	-1.12	-3.31	-1.93	0.65	-0.61	1.77	1.02	0.53	-0.23	-1.61	-0.89	-0.48	0.7	1.18	-2.8	0.47	-0.5	0.17	0.62	-	-0.5	0.41	-0.79	-0.04	0.37	0.38	-1.11	-2.29
Lsat_1_v5_gn_3_85740.1 (RBCL)	0.59	1.07	1.16	1.34	-1.41	-2.2	0.82	-0.04	0.46	0.26	-0.65	-0.68	-0.83	-3.68	-0.8	0.06	0.31	0.93	-0.55	0.17	0.75	0.16	-5.49	-0.06	-0.17	0.06	-0.68	-0.26	-0.79	-1.65	-2.17
Lsat_1_v5_gn_4_102701.1 (RBCL)	0.17	0.89	1.16	1.41	-1.57	-1.42	0.82	-0.14	-0.03	0.21	-0.64	-0.72	-1.0	-2.54	-0.92	-0.02	0.07	0.09	0.2	0.56	0.89	0.09	-3.69	0.01	-0.06	-0.06	-0.09	-0.28	-0.4	-0.83	-1.26
Lsat_1_v5_gn_4_135460.1 (PSBA)	-0.19	0.18	0.09	0.11	-0.25	0.03	0.35	0.07	-0.29	-0.31	-0.42	-0.45	-0.05	-0.03	0.0	-0.07	-0.16	1.09	-0.1	-0.09	0.26	0.01	-0.1	0.03	-0.04	-0.02	-0.13	-0.16	0.1	-0.23	-0.13
Lsat_1_v5_gn_4_145420.1 (ATP1)	-0.18	0.55	0.67	0.71	-0.55	-0.47	0.92	-0.2	1.18	0.71	-0.08	-0.15	0.0	-0.48	0.01	0.62	0.87	-1.44	-0.68	-0.18	0.17	-0.2	-3.03	-0.27	-0.38	-0.46	-0.31	-0.41	-0.46	-1.12	-1.52
Lsat_1_v5_gn_4_145441.1 (RH3)	-0.42	0.37	0.5	0.62	-0.95	-0.83	0.57	-0.37	1.36	0.98	-0.24	-0.08	-0.04	-0.42	-0.19	0.49	0.76	-1.21	-0.44	0.17	0.23	-0.06	-2.89	0.02	-0.17	-0.32	-0.3	-0.24	-0.55	-0.88	-0.95
Lsat_1_v5_gn_4_147721.1 (NDHB.2)	0.42	0.92	1.21	1.19	-0.48	-0.32	1.1	0.02	-0.0	-0.22	0.04	-1.13	-0.71	-1.45	-0.71	-0.39	-0.27	1.15	-0.54	-0.15	0.44	-0.18	-3.22	-0.31	-0.22	-0.35	-0.13	-0.28	-0.33	-0.98	-1.55
Lsat_1_v5_gn_4_174220.1 (BAGP1)	-0.95	0.2	0.39	0.53	-1.33	-1.01	0.23	-0.47	0.51	0.45	0.86	-0.35	-0.26	-0.73	0.17	0.34	0.42	0.71	-0.28	0.32	0.57	0.06	-0.4	-0.09	-0.23	-0.16	-0.09	-0.68	-0.15	-0.81	-1.01
Lsat_1_v5_gn_4_174241.1 (TMS1)	-0.45	0.69	0.88	1.11	-1.14	-0.88	0.35	-0.35	0.3	0.25	-0.43	-0.46	-0.42	-0.83	-0.14	-0.08	0.04	0.34	-0.32	0.25	0.57	0.07	-0.63	0.05	-0.05	0.0	0.01	-0.38	0.11	-0.66	-0.74
Lsat_1_v5_gn_4_63021.1 (DY1)	-0.13	0.64	0.71	0.65	-1.07	-0.87	0.41	-0.26	0.79	0.43	-0.11	-0.08	-0.21	-0.93	0.02	0.35	0.28	0.92	-0.39	0.12	0.47	0.05	-2.43	-0.11	-0.28	-0.21	-0.22	-0.47	-0.42	-0.78	-1.29
Lsat_1_v5_gn_4_99801.1 (DY1)	-0.13	0.64	0.71	0.65	-1.07	-0.87	0.41	-0.26	0.79	0.43	-0.11	-0.08	-0.21	-0.93	0.02	0.35	0.28	0.92	-0.39	0.12	0.47	0.05	-2.43	-0.11	-0.28	-0.21	-0.22	-0.47	-0.42	-0.78	-1.29
Lsat_1_v5_gn_5_176141.1 (PSBE)	-0.5	0.03	0.61	0.91	-1.52	-1.53	-0.23	-0.05	0.09	-0.04	-0.67	-1.17	-1.22	-1.7	-0.45	0.04	-0.21	2.37	0.02	0.46	0.72	0.09	-4.2	-0.11	0.04	-0.03	0.08	-0.42	-0.01	-1.07	-1.56
Lsat_1_v5_gn_5_181820.1 (ATP1)	0.34	1.07	1.11	1.12	-0.67	-0.54	0.7	-0.31	0.16	-0.12	-0.43	-0.55	-0.65	-1.28	-0.49	-0.31	-0.35	0.41	-0.19	0.13	0.48	0.14	-2.1	0.06	-0.1	-0.06	-0.07	-0.15	-0.22	-0.74	-1.15
Lsat_1_v5_gn_5_181880.1 (RH10)	0.95	0.47	-	0.63	0.27	-	0.86	-0.64	0.97	0.9	0.29	0.98	1.17	-0.67	-2.5	1.34	1.73	-1.42	-	-1.21	1.27	-2.4	-2.16	-0.28	-2.75	-0.89	0.33	-	-2.71	-	-
Lsat_1_v5_gn_5_181901.1 (RAF36)	-0.25	0.16	0.45	0.56	-0.94	-0.72	1.16	0.25	0.69	0.46	-0.18	-0.39	-0.36	-1.3	-0.12	0.03	0.12	-0.3	-0.09	0.38	0.95	0.14	-3.06	0.09	-0.01	-0.08	-0.1	-0.16	-0.4	-0.79	-1.26
Lsat_1_v5_gn_6_14541.1	-0.45	-0.05	0.2	0.24	-0.84	-0.6	1.02	0.29	0.68	0.54	-0.12	-0.11	-0.24	-1.69	-0.13	0.21	0.22	-0.06	-0.03	0.44	0.92	0.17	-2.83	0.04	-0.04	0.04	0.05	-0.31	-0.28	-0.59	-1.27
Lsat_1_v5_gn_6_14561.1	0.16	0.62	0.86	0.95	-1.01	-0.84	0.7	-0.03	0.08	-0.14	-0.39	-0.58	-0.75	-2.18	-0.65	-0.4	-0.36	0.03	0.14	0.55	0.98	0.39	-3.36	0.22	0.14	0.14	0.23	-0.1	-0.02	-0.6	-1.12
Lsat_1_v5_gn_6_94260.1	-0.15	0.26	0.48	0.46	-0.75	-0.65	0.96	0.17	0.49	0.29	-0.18	-0.28	-0.41	-1.28	-0.04	0.18	0.1	1.02	-0.15	0.27	0.73	0.1	-2.85	-0.06	-0.19	-0.1	-0.15	-0.38	-0.39	-0.8	-1.37
Lsat_1_v5_gn_6_94280.1 (PRK6)	0.18	1.04	1.0	1.22	-0.11	-0.11	1.03	0.23	-0.83	-0.75	-0.98	-1.65	-1.02	-1.94	-1.76	-0.94	-0.48	1.52	-0.24	0.13	0.6	-0.03	-2.52	0.22	0.01	-0.06	-0.4	-0.37	-0.36	-0.46	-0.99
Lsat_1_v5_gn_7_14980.1 (RBCL)	-0.43	0.93	0.97	0.98	-1.35	-0.24	0.54	-0.49	-1.04	-0.37	-1.78	-1.63	-1.34	-1.77	-0.26	-0.1	0.18	1.88	-0.03	0.47	0.26	0.48	-1.05	-0.23	-0.63	0.18	0.12	-0.37	-0.55	-0.34	-1.09
Lsat_1_v5_gn_7_68801.1 (ATPE)	0.35	0.34	0.69	0.69	-0.85	-1.51	0.42	0.12	0.32	0.47	0.34	0.23	-0.36	-3.12	-0.8	0.45	0.41	0.52	0.29	0.41	0.46	0.22	-3.68	0.12	-0.07	-0.14	-0.31	0.26	-0.95	-1.37	-2.4
Lsat_1_v5_gn_8_122301.1 (ATPA)	0.72	0.71	0.92	1.03	-0.94	-1.0	0.46	-0.12	0.11	-0.03	-0.27	-0.17	-0.12	-1.95	-1.03	-0.04	0.25	0.93	0.13	0.09	0.27	-0.44	-4.64	0.16	-0.11	0.21	-0.74	0.16	-0.39	-0.58	-1.12
Lsat_1_v5_gn_8_133980.1 (PSBA)	0.19	1.0	0.88	1.1	-0.82	-0.58	1.06	0.25	-0.05	-0.28	-0.68	-1.17	-1.41	-2.05	-0.63	-0.23	-0.43	1.61	-0.04	0.05	0.63	0.05	-1.45	-0.39	-0.33	-0.2	-0.29	-0.54	-0.16	-1.03	-1.74
Lsat_1_v5_gn_8_139840.1 (RAF36)	-0.25	0.17	0.38	0.38	-0.75	-0.56	1.09	0.41	0.74	0.57	-0.01	0.01	-0.15	-1.66	-0.07	0.28	0.28	-0.52	-0.45	0.27	0.86	0.16	-3.03	-0.08	-0.14	-0.13	-0.11	-0.39	-0.38	-0.67	-1.3
Lsat_1_v5_gn_8_139860.1	0.12	0.4	0.67	0.7	-0.72	-0.58	1.07	0.09	0.39	0.3	-0.17	-0.29	-0.25	-2.03	-0.63	-0.17	-0.03	0.59	-0.59	0.28	0.78	0.08	-3.35	0.11	-0.06	-0.09	-0.05	-0.0	-0.24	-0.7	-1.27
Lsat_1_v5_gn_8_161300.1 (PETD)	0.4	0.96	1.01	1.08	-1.18	-0.82	0.22	0.01	0.05	-0.44	-0.04	-0.31	-0.74	-1.16	-0.66	-0.19	-0.02	1.05	-0.05	0.44	0.58	0.09	-2.54	-0.09	-0.57	-0.17	-0.27	-0.32	0.04	-0.47	-1.61
Lsat_1_v5_gn_8_19261.1 (ATPI)	0.22	1.16	0.93	1.06	-0.28	-1.02	0.06	-0.46	-0.72	-0.52	-0.64	-1.28	-1.51	-2.49	-0.87	-0.81	-0.36	2.97	-0.99	-0.16	-0.12	-1.02	-2.53	-0.33	-0.99	-0.51	-0.24	-0.38	-0.7	-1.06	-2.37
Lsat_1_v5_gn_9_47020.1 (FKBP15-2)	-	-	-	3.56	-	-	-	-	-	-	3.34	-	-	-	-	-	-	3.17	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_9_50921.1 (PSBE)	-0.5	0.03	0.61	0.91	-1.52	-1.53	-0.23	-0.05	0.09	-0.04	-0.67	-1.17	-1.22	-1.7	-0.45	0.04	-0.21	2.37	0.02	0.46	0.72	0.09	-4.2	-0.11	0.04	-0.03	0.08	-0.42	-0.01	-1.07	-1.56

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.