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  5. Spov3_chr1.03959

Spov3_chr1.03959 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional co-repressor *(TPL/TPR). auxin signalling transcriptional co-repressor *(TPL/TPR)


Gene families : OG0001592 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.03959
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_31280.1 TPR1 auxin signalling transcriptional co-repressor... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004134 4-alpha-glucanotransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004484 mRNA guanylyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006370 7-methylguanosine mRNA capping IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008192 RNA guanylyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:2001070 starch binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 456 490
IPR001680 WD40_rpt 936 969
No external refs found!