Bra008864 (CALS3, ATGSL12, gsl12, GSL12)


Aliases : CALS3, ATGSL12, gsl12, GSL12

Description : callose synthase. EC_2.4 glycosyltransferase


Gene families : OG0002088 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra008864
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175


Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA Interproscan
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA Interproscan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005544 calcium-dependent phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008172 S-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016125 sterol metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR026899 FKS1-like_dom1 298 409
IPR003440 Glyco_trans_48 1127 1822
IPR003440 Glyco_trans_48 1032 1122
IPR039431 Vta1/CALS_N 84 149
No external refs found!