Spov3_chr1.00031 (CALS3, ATGSL12, gsl12, GSL12)

Aliases : CALS3, ATGSL12, gsl12, GSL12

Description : EC_2.4 glycosyltransferase. callose synthase

Gene families : OG0002088 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002088_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.00031
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_110

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0000786	nucleosome	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005643	nuclear pore	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006334	nucleosome assembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006338	chromatin remodeling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007155	cell adhesion	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010564	regulation of cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010639	negative regulation of organelle organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010948	negative regulation of cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017056	structural constituent of nuclear pore	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030833	regulation of actin filament polymerization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031047	regulatory ncRNA-mediated gene silencing	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031577	spindle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032271	regulation of protein polymerization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0032993	protein-DNA complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033044	regulation of chromosome organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0034061	DNA polymerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034728	nucleosome organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045786	negative regulation of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048519	negative regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051783	regulation of nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051784	negative regulation of nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051983	regulation of chromosome segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051985	negative regulation of chromosome segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065004	protein-DNA complex assembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071173	spindle assembly checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071174	mitotic spindle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1905818	regulation of chromosome separation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1905819	negative regulation of chromosome separation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2001251	negative regulation of chromosome organization	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR039431	Vta1/CALS_N	45	174
IPR026899	FKS1-like_dom1	323	439
IPR003440	Glyco_trans_48	1011	1720

External Links

No external refs found!

Spov3_chr1.00031 (CALS3, ATGSL12, gsl12, GSL12)

Expression Profile

Co-expression Networks

Functional Annotation