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  5. Bra007791

Bra007791 (CRR22)


Aliases : CRR22

Description : RNA editing factor *(CRR22)


Gene families : OG0001216 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra007791
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_28


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008290 F-actin capping protein complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010639 negative regulation of organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030834 regulation of actin filament depolymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030835 negative regulation of actin filament depolymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030837 negative regulation of actin filament polymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032272 negative regulation of protein polymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032535 regulation of cellular component size IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032956 regulation of actin cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032970 regulation of actin filament-based process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043254 regulation of protein-containing complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051016 barbed-end actin filament capping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051493 regulation of cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051494 negative regulation of cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051693 actin filament capping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090066 regulation of anatomical structure size IEP Brassica rapa GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901879 regulation of protein depolymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901880 negative regulation of protein depolymerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902903 regulation of supramolecular fiber organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 303 350
IPR002885 Pentatricopeptide_rpt 507 553
IPR002885 Pentatricopeptide_rpt 406 452
IPR046848 E_motif 623 685
IPR002885 Pentatricopeptide_rpt 105 151
IPR032867 DYW_dom 721 812
IPR002885 Pentatricopeptide_rpt 378 403
IPR002885 Pentatricopeptide_rpt 205 234
IPR002885 Pentatricopeptide_rpt 580 605
IPR002885 Pentatricopeptide_rpt 181 203
IPR002885 Pentatricopeptide_rpt 480 505
No external refs found!