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  5. Lsat_1_v5_gn_8_140821.1

Lsat_1_v5_gn_8_140821.1 (EMS1, EXS)


Aliases : EMS1, EXS

Description : not classified


Gene families : OG0000056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_140821.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_0_43161.1 AtRLP26, RLP26 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_137921.1 RLP37, EMB2800, AtRLP37 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_138620.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_140561.1 AtRLP22, RLP22 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_157441.1 AtRLP52, RLP52 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043531 ADP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 549 608
IPR001611 Leu-rich_rpt 105 119
IPR013210 LRR_N_plant-typ 38 74
IPR001611 Leu-rich_rpt 504 525
IPR001611 Leu-rich_rpt 776 797
No external refs found!