Heatmap: Cluster_33 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.3 -0.86 -2.47 -2.48 2.41 1.43 -1.08 -2.92 -0.38 -3.9 -0.69 -1.95 -0.07 1.59 1.52 -0.28 -1.73 0.66 -0.17 -0.51 -1.32 -1.2 0.62 -0.45 -3.91 -0.36 -0.23 -1.04 0.63 0.0 -0.71
-1.17 -4.43 -5.42 - 3.59 2.35 -3.88 -5.85 -2.29 -1.83 -1.63 -2.73 -3.62 1.02 0.93 -0.69 -3.34 - -0.33 -2.1 -0.79 -0.6 -4.28 0.37 -0.74 -0.4 0.26 -2.09 -0.52 -1.75 -2.76
1.46 -1.02 -3.17 -1.87 3.75 1.36 -4.17 -2.17 -0.73 -1.4 0.06 -2.95 - -0.44 0.94 -1.59 -2.29 - -3.66 -2.7 -1.42 -1.29 -0.49 -0.43 -3.65 -1.61 -0.25 -1.96 0.21 -0.63 -
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 3.15 - - - - - - - - - 1.72 - - 3.71 - - - - 1.54 - - - - - - - 1.5
0.8 1.04 0.34 -0.56 0.84 0.46 -0.12 -0.17 -0.37 -0.36 -0.33 -0.81 -0.37 -0.06 0.64 -0.04 -0.38 -0.34 0.05 -0.5 -0.54 -0.7 0.56 -0.32 -0.41 -0.66 -0.56 -0.98 0.17 0.05 0.56
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 4.0 - - - - - - - - - - - - 3.91 - - - - - - - - - - - - -
- - - - 3.04 - - - - - - - - - - - - 3.95 - 2.86 - - - - - - - - - - -
0.45 2.55 0.65 - 2.55 0.41 -3.34 -3.55 -3.96 -2.86 -3.74 - 0.63 -1.58 -1.26 -1.19 -1.8 1.73 -3.82 - -1.86 -1.5 2.42 -1.9 -1.42 -3.06 -3.61 -1.6 -3.84 -0.59 -2.02
0.25 1.62 -0.14 -0.43 0.82 0.22 -0.72 -1.01 -0.56 -0.26 -0.11 -0.31 -0.49 0.2 0.21 0.01 -0.08 0.05 -0.24 -0.45 -0.65 -0.46 1.36 -0.58 -0.61 -0.53 -0.44 -0.89 -0.29 -0.03 0.26
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.04 0.21 -0.4 -0.38 0.77 0.6 -0.07 -0.32 -0.32 -0.31 -0.12 -0.44 -0.06 0.58 0.17 -0.01 -0.29 0.32 -0.06 -0.59 -0.18 -0.59 0.82 -0.68 -0.25 -0.32 -0.1 -0.45 0.06 0.25 0.46
- - - - 3.93 - - - - - - - - - - 2.62 - - - - 2.14 - - - 2.37 - - - - - -
0.85 0.73 -0.26 -0.84 1.84 0.46 -0.57 -0.66 -2.35 -0.54 0.24 -0.5 -0.55 1.14 0.07 -0.75 -1.93 0.48 -0.87 -0.84 -0.08 -1.08 1.36 -1.83 0.23 -0.62 -0.64 -1.76 -0.9 0.22 0.14
-1.32 -0.34 -0.6 -0.69 2.44 1.66 -0.84 -0.07 -0.08 -0.34 -0.43 -0.81 -1.0 0.16 -0.48 -0.78 -1.26 1.22 -0.78 -1.27 -0.92 -0.31 0.97 -1.55 -0.76 -0.28 -0.62 -0.75 0.28 -0.38 -1.27
0.18 0.14 0.23 0.25 1.16 0.44 -0.27 -0.5 -0.63 -0.21 -0.32 -0.24 0.03 0.29 0.63 0.06 0.05 0.27 -0.03 -0.57 -0.45 -0.24 0.15 -0.55 -0.35 -0.25 -0.36 -0.06 -0.22 -0.1 -0.23
0.55 -1.53 -1.51 -2.58 3.9 1.46 - -0.98 -1.3 -0.98 -0.94 -1.91 - 0.89 0.34 -1.27 -2.57 -2.99 -1.12 - -2.63 -1.08 -1.03 -1.27 -3.0 -3.79 -1.96 -2.57 0.42 -0.44 -2.02
0.44 0.45 - - 3.62 0.66 - -1.0 -0.6 -2.92 -0.79 -0.4 - 0.64 1.19 -1.41 - - -2.78 - -0.61 -2.99 0.06 -1.21 - -1.76 -0.39 -1.11 1.13 0.11 -1.58
1.45 2.87 -1.5 -0.35 2.12 0.16 -2.17 -4.12 -5.02 - -1.23 -2.37 -0.54 -1.19 -1.49 -2.42 -2.43 0.86 -5.04 -2.63 -2.24 -4.77 2.83 -2.05 -1.51 -2.0 -1.69 -2.78 -1.22 -1.23 -3.85
0.6 0.7 -0.45 -2.15 2.35 1.18 -0.85 -0.77 -1.12 -1.21 -0.65 -0.83 -1.02 1.41 1.19 -0.06 -0.56 0.51 -0.05 -0.49 -0.44 -0.81 -2.41 -1.55 -1.03 -0.6 -0.38 -0.25 -0.16 -1.22 -2.39
0.45 0.99 0.13 -0.51 0.74 0.05 -0.84 -1.01 -0.62 -0.41 -0.51 -0.24 0.47 -0.14 -0.26 -0.1 0.04 0.66 -0.45 -0.27 -0.44 -0.3 0.8 -0.27 -0.15 -0.21 -0.2 -0.24 -0.09 0.01 0.44
0.49 1.81 0.22 0.34 1.02 -0.07 -1.24 -1.56 -0.31 -0.43 -0.32 -0.31 -0.38 -0.75 -0.3 -0.01 -0.29 0.24 -1.02 -0.65 -0.51 -0.78 0.92 -0.59 -0.22 -0.34 -0.49 -0.91 0.01 0.1 0.72
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.02 0.28 -0.5 -0.5 0.77 0.46 -0.45 -0.87 -0.15 -0.02 -0.04 -0.31 -0.06 0.35 0.5 0.06 -0.15 0.15 -0.12 -0.37 -0.25 -0.27 0.86 -0.36 -0.24 -0.11 -0.17 -0.33 0.12 0.11 0.11
1.36 3.14 1.14 1.28 3.3 -0.69 -1.71 -3.85 - -5.06 -2.92 - - -3.14 -1.52 -1.97 -2.05 - - -3.2 -4.23 -4.89 0.95 - -4.09 -2.23 -3.23 -5.27 -3.43 -3.03 -1.92
- - - - 3.32 - - - - - - - - - - - - 4.4 - - - - - - - - - - - - -
0.24 0.7 0.24 -0.4 0.25 0.11 -0.26 -0.69 -0.43 -0.33 -0.34 -0.29 0.16 -0.06 -0.19 0.14 0.15 -0.17 0.09 -0.22 -0.2 -0.12 0.53 -0.31 -0.11 0.02 -0.04 -0.13 0.28 0.25 0.19
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.11 1.82 - -0.15 2.35 0.29 -0.67 -0.63 - -0.77 - -1.23 0.15 1.12 -0.59 1.0 0.42 -0.87 -2.39 0.56 0.53 0.36 - -1.44 -2.43 0.26 0.28 -1.49 -0.37 -0.43 -0.6
- - - - 3.56 - - - - - - - - - - - - 4.26 - - - - - - - - - - - - -
- - - - 3.67 - 2.05 - - - - - 2.1 - - 2.53 - - - - - - - - - - - - - 2.03 -
- - - 0.34 2.39 - - 1.67 - - - - 0.37 - - - - 2.6 1.46 -0.0 - - - - - 0.93 - 1.42 - 1.04 1.83
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
1.96 - - - 2.63 0.58 - - - - - - - 2.1 - 1.9 - - - 0.52 - - 3.32 - - - - - - - -
1.06 0.49 -2.7 -2.77 2.97 1.43 -1.39 -4.9 -1.63 -2.18 -1.53 -0.74 -1.35 0.7 1.18 -1.06 -3.02 0.25 -0.48 -1.71 -1.22 -1.43 2.14 -3.12 -2.16 -1.58 -1.09 -1.63 -0.31 -2.84 -4.62
1.04 1.72 1.17 -0.41 2.27 -0.0 -1.86 -2.71 -1.63 -1.61 -1.58 -1.45 -0.53 1.43 1.21 -0.86 -1.33 1.55 -0.52 -1.85 -1.7 -1.55 0.83 -2.39 -2.12 -1.42 -1.42 -1.48 -2.14 -1.94 -3.87
0.54 0.92 0.34 0.0 1.05 0.73 -0.92 -0.48 -0.61 -0.83 -0.46 -0.33 -0.06 0.59 0.03 -0.05 -0.59 -0.05 -0.22 -0.78 -0.46 -0.35 0.23 -0.49 -0.45 -0.35 -0.37 -0.41 0.15 0.1 0.61
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 4.41 - - - - 3.28 - - - - - - - - - - - - - - - - - - - - -
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 3.2 - - - - - - - - - - - - 3.11 - 1.5 - - 3.37 - - - - - - - -
-2.49 - - - 3.66 2.14 -5.12 - -1.87 -1.87 -1.42 -4.46 -2.46 0.76 0.72 -1.73 -2.42 - 0.07 -3.28 0.1 -0.11 - -0.0 0.55 -0.73 -0.47 -1.95 -0.08 -0.97 -2.94
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 2.81 - 4.15 - - - - - - - - 2.65 - - - - - - - - - - - - - - - - -
0.4 -0.06 -0.15 -0.48 1.37 0.77 -0.6 -0.46 -0.86 -0.91 -1.06 -1.3 -0.47 0.69 0.37 -0.12 -0.88 0.43 -0.5 -0.96 -0.67 -0.87 1.56 -1.09 -0.35 -0.34 -0.47 -0.5 0.33 0.62 0.51
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 3.82 - - - - - 3.21 - - - - - - 2.93 - - - - - - - - - - - - -
0.79 1.46 -0.11 -1.03 1.09 0.05 -0.98 -0.98 -0.65 -0.58 -0.49 -1.1 -0.26 0.14 0.43 -0.72 -0.73 1.58 -0.25 -0.77 -0.61 -0.35 1.69 -0.9 -0.87 -0.49 -0.85 -0.74 -0.61 -0.75 -0.66
0.35 - - - 2.85 - -1.05 - 0.11 - - - -0.78 - 0.12 - 0.89 3.05 - - - -0.76 2.31 - -0.1 -1.03 0.77 - -1.12 - -
0.13 0.31 0.11 0.08 0.72 0.75 -0.71 -1.07 -0.41 -0.45 -0.12 -0.42 -0.01 0.45 0.31 -0.3 -0.53 0.23 -0.22 -0.57 -0.57 -0.5 1.13 -0.64 -0.57 -0.06 -0.19 -0.71 0.32 0.21 0.5
-0.16 0.8 0.43 0.03 1.23 0.44 -0.5 -0.44 -0.27 -0.13 0.04 -0.51 -0.26 0.38 0.45 -0.11 -0.29 0.71 -0.24 -0.65 -0.77 -0.56 -0.3 -0.68 -0.76 -0.57 -0.27 -0.67 0.2 0.15 0.43
0.9 -0.2 0.35 0.52 1.41 0.29 -1.99 -2.3 -0.55 -0.39 -0.36 -0.39 -1.74 0.97 1.53 0.27 -0.06 0.5 -0.65 -1.26 -0.76 -0.78 -0.9 -1.49 -0.99 -0.88 -0.49 -0.11 0.57 0.75 -0.95
1.35 2.04 0.64 -0.21 2.15 1.18 -2.12 -2.03 -1.78 -1.77 -1.23 -1.79 -1.42 0.9 0.63 -0.51 -1.1 1.16 -0.42 -1.91 -1.67 -1.64 0.97 -1.67 -2.08 -1.64 -1.56 -1.52 -0.88 -1.53 -2.5
0.55 1.8 0.47 0.23 -0.12 -1.49 -1.14 -1.64 -0.61 -0.37 -0.02 0.07 0.57 -0.36 0.3 0.28 0.27 0.4 -0.93 -0.24 -0.76 -1.11 0.62 -0.1 -0.59 -0.83 -0.81 -0.38 -0.24 0.2 0.34
0.79 -0.04 -0.19 0.38 2.02 0.8 -0.42 -0.34 0.04 0.0 -0.09 -0.15 -1.78 -0.21 0.43 -0.19 -0.94 -1.34 -1.0 -0.53 -0.52 -0.01 -0.36 -0.56 -1.15 -0.38 -0.22 -0.06 0.31 0.04 -0.05
- - - - 4.01 - - - - - - - - - - - - 3.9 - - - - - - - - - - - - -
0.64 0.12 0.35 0.28 1.85 0.98 -0.77 -0.94 -0.09 -0.38 -0.04 -0.38 -1.55 -0.12 0.44 -0.22 -0.58 0.59 -0.52 -0.82 -0.47 -0.27 -0.37 -0.91 -0.95 -0.19 -0.02 -0.22 0.05 -0.09 -0.43
- - - 2.46 3.84 - - - - - - - - - - - - - - - - - 3.47 - - - - - - - -
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
0.21 0.56 0.03 -0.24 0.71 0.65 -0.39 -0.42 -0.27 -0.34 0.0 -0.37 -0.3 0.66 0.31 0.07 -0.56 0.02 -0.28 -0.69 -0.51 -0.46 0.74 -0.52 -0.46 -0.23 -0.09 -0.66 0.16 0.32 0.31
1.71 2.1 0.42 -0.64 2.65 0.3 -2.44 -2.82 -3.45 - -3.17 -4.51 0.01 0.79 1.01 -0.37 -3.31 1.14 -1.56 -2.54 -2.16 -2.82 -1.4 -2.11 -2.11 -3.54 - -3.46 0.88 0.25 -0.69
- 0.15 -1.85 -1.9 1.66 -0.55 0.71 1.27 - - -0.01 - 0.13 0.93 0.77 - -0.94 1.83 2.23 - -1.2 -1.75 - -2.17 - -0.46 -2.24 0.15 0.67 0.04 0.45
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 4.29 2.48 - - - - 0.38 - - - 0.94 - -0.79 - - - 0.02 - - - - - 0.0 - - - -
- - - - 3.47 - - - - - - - - - - - - - - - - - 4.31 - - - - - - - -
0.27 0.82 -0.35 -0.94 2.62 1.08 -2.1 -2.03 -0.65 -1.16 -0.95 -1.28 -0.23 -0.14 -0.2 -0.15 -0.75 0.38 -0.83 -0.82 -0.96 -0.85 1.75 -1.1 -0.8 -0.21 -0.13 -1.1 -0.94 -0.25 -1.61
-1.28 0.07 - -2.3 2.6 -2.63 - - - - - -2.54 2.98 -0.94 -2.53 -1.49 -2.53 2.92 - -2.81 -0.93 - 0.99 - - - - -2.67 - - 1.77
-1.6 -1.59 -1.53 -0.67 3.06 1.61 -2.1 -1.03 0.08 -0.09 0.18 0.15 -1.99 0.41 -1.25 -0.78 -1.38 -1.58 -0.72 -0.8 -0.84 -0.3 -0.92 -0.6 -0.47 -0.09 -0.11 -1.06 0.25 -0.04 -0.45
0.8 1.71 -0.13 -0.82 1.15 0.03 -0.71 -1.05 -0.89 -1.13 -0.68 -0.77 -0.1 0.54 0.45 -0.07 -0.38 1.04 -0.57 -0.94 -0.82 -0.75 1.64 -1.03 -0.9 -1.04 -0.54 -0.81 -0.6 -0.41 -0.37
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.06 -3.23 -2.98 -1.63 2.62 0.9 -2.69 -3.58 -0.15 0.08 0.45 0.07 -1.87 1.1 0.56 -0.9 -0.68 0.64 -0.29 0.21 -0.45 -0.06 1.45 -1.16 -0.93 -1.0 0.25 0.28 -1.96 -2.76 -1.83
0.91 0.44 0.67 0.29 1.6 0.44 -1.52 -2.75 -0.73 -0.54 -0.56 -0.68 -1.3 0.96 0.87 0.39 0.1 0.17 -0.07 -0.57 -0.24 -0.26 -2.19 -0.84 -0.52 -0.28 0.0 -0.13 -0.38 -0.26 -0.63
0.11 0.73 -0.8 -1.77 2.43 1.15 -1.27 -1.69 -0.98 -0.47 -1.27 -1.58 -1.49 0.61 0.69 -0.45 -1.88 1.1 -0.91 -1.35 -1.83 -1.36 2.06 -1.5 -1.26 -2.1 -0.97 -2.28 0.16 -0.01 -0.27
- - - - 4.4 - - - - - - - - - - - - 3.3 - - - - - - - - - - - - -
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
0.05 2.51 1.18 0.96 1.45 -0.81 -1.36 -2.14 -1.54 -0.66 -0.23 0.41 0.88 -1.83 -0.82 0.69 0.12 -1.96 -2.01 -0.81 -0.69 -0.56 -0.27 -1.57 -0.54 -0.63 -0.52 -1.86 -0.82 -0.41 -1.21
2.05 3.45 1.03 0.4 3.09 -0.78 -1.71 -5.19 -5.43 -5.49 -2.87 -4.8 -5.48 -2.36 -2.58 -1.46 -1.9 -1.31 -4.53 -5.86 -4.37 -5.35 -0.23 -6.48 -3.89 -4.91 -2.49 - -3.43 -3.83 -4.46
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -
0.84 0.36 -0.74 -0.87 1.74 0.86 -0.75 -0.36 -0.44 -0.78 -0.37 -0.92 -1.02 0.17 0.43 -0.05 -0.7 -1.42 0.13 -0.84 0.02 -0.01 1.6 -0.71 -0.48 -0.34 -0.25 0.19 0.03 -0.51 -2.27
0.55 0.24 -1.11 -0.98 1.71 0.69 -1.18 -1.08 -0.45 -0.82 -0.27 -1.03 -1.16 -0.01 0.61 -0.05 -0.55 -0.46 0.39 -0.83 0.1 0.21 1.66 -0.71 -0.31 -0.55 -0.16 0.26 0.29 -0.46 -2.19
- - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.