Lsat_1_v5_gn_7_74860.1

Description : component *(bL25m) of large mitoribosomal-subunit proteome

Gene families : OG0032273 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_74860.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_47

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008097	5S rRNA binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006188	IMP biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006448	regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006449	regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0008303	caspase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016255	attachment of GPI anchor to protein	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016842	amidine-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034248	regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034250	positive regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045901	positive regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045905	positive regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046040	IMP metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR020057	Ribosomal_bL25_b-dom	165	248
IPR029751	Ribosomal_L25_dom	55	156

External Links

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Lsat_1_v5_gn_7_74860.1

Expression Profile

Co-expression Networks

Functional Annotation