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Aliases : NOB1, AtNOB1
Description : pre-rRNA processing endonuclease involved in ITS1 rRNA removal *(NOB1)
Gene families : OG0039830 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_87181.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_150 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005643 | nuclear pore | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005685 | U1 snRNP | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006376 | mRNA splice site recognition | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006413 | translational initiation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008097 | 5S rRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0010181 | FMN binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022618 | protein-RNA complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030515 | snoRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032040 | small-subunit processome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0034457 | Mpp10 complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043603 | amide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071826 | protein-RNA complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| No external refs found! |