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  5. Lsat_1_v5_gn_6_31000.1

Lsat_1_v5_gn_6_31000.1 (PAL2, ATPAL2)


Aliases : PAL2, ATPAL2

Description : phenylalanine ammonia lyase *(PAL). EC_4.3 carbon-nitrogen lyase


Gene families : OG0001949 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_31000.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_2_106540.1 PAL1, ATPAL1 phenylalanine ammonia lyase *(PAL). EC_4.3 carbon-nitrogen lyase 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_31080.1 PAL1, ATPAL1 phenylalanine ammonia lyase *(PAL). EC_4.3 carbon-nitrogen lyase 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003989 acetyl-CoA carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004506 squalene monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016421 CoA carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016872 intramolecular lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 56 532
No external refs found!