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Description : not classified
Gene families : OG0000482 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000482_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_8501.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_1_27300.1 | ATU2AF65A | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_3_67381.1 | ATU2AF65A | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004358 | glutamate N-acetyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005985 | sucrose metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005986 | sucrose biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006013 | mannose metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006525 | arginine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006526 | arginine biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0008290 | F-actin capping protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015923 | mannosidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019203 | carbohydrate phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030832 | regulation of actin filament length | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030834 | regulation of actin filament depolymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030835 | negative regulation of actin filament depolymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030837 | negative regulation of actin filament polymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031333 | negative regulation of protein-containing complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032272 | negative regulation of protein polymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032535 | regulation of cellular component size | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033043 | regulation of organelle organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043242 | negative regulation of protein-containing complex disassembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0050307 | sucrose-phosphate phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0050308 | sugar-phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051016 | barbed-end actin filament capping | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051494 | negative regulation of cytoskeleton organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051693 | actin filament capping | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065008 | regulation of biological quality | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070475 | rRNA base methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0110053 | regulation of actin filament organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901879 | regulation of protein depolymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901880 | negative regulation of protein depolymerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1902904 | negative regulation of supramolecular fiber organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |