Lsat_1_v5_gn_5_190321.1


Description : pectin methylesterase. EC_3.1 hydrolase acting on ester bond


Gene families : OG0046731 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_190321.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_33


Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009690 cytokinin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019139 cytokinin dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 31 179
IPR000070 Pectinesterase_cat 246 539
No external refs found!