Lsat_1_v5_gn_4_154841.1 (AtHMP50)

Aliases : AtHMP50

Description : not classified

Gene families : OG0037946 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_154841.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_190

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	19	73

External Links

No external refs found!