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Aliases : SWEETIE
Description : not classified
Gene families : OG0000657 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000657_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_153700.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_123 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003777 | microtubule motor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004146 | dihydrofolate reductase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006382 | adenosine to inosine editing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006479 | protein methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006810 | transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007017 | microtubule-based process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007018 | microtubule-based movement | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008017 | microtubule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008213 | protein alkylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015631 | tubulin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016553 | base conversion or substitution editing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016571 | histone methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0017119 | Golgi transport complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019239 | deaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030117 | membrane coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030118 | clathrin coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030120 | vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030126 | COPI vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031047 | regulatory ncRNA-mediated gene silencing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034968 | histone lysine methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043531 | ADP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051234 | establishment of localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0070403 | NAD+ binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:2001070 | starch binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046837 | Laa1/Sip1/HEATR5-like_HEAT | 1217 | 1401 |
| No external refs found! |