Lsat_1_v5_gn_3_81380.1

Description : component *(uL2m) of large mitoribosomal-subunit proteome

Gene families : OG0000260 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000260_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_81380.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_14

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006534	cysteine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006563	L-serine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006790	sulfur compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008017	microtubule binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008092	cytoskeletal protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008374	O-acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008652	amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015631	tubulin binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016407	acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016412	serine O-acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016413	O-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0017038	protein import	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019344	cysteine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032784	regulation of DNA-templated transcription elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032786	positive regulation of DNA-templated transcription, elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0044183	protein folding chaperone	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0120009	intermembrane lipid transfer	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0120013	lipid transfer activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR022666	Ribosomal_uL2_RNA-bd_dom	31	80

External Links

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Lsat_1_v5_gn_3_81380.1

Expression Profile

Co-expression Networks

Functional Annotation