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  5. Lsat_1_v5_gn_3_47280.1

Lsat_1_v5_gn_3_47280.1 (ATROPGEF1, ROPGEF1)


Aliases : ATROPGEF1, ROPGEF1

Description : RopGEF guanine nucleotide exchange factor *(PRONE)


Gene families : OG0016343 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_47280.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_42


Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016872 intramolecular lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030286 dynein complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005512 PRONE_dom 110 483
No external refs found!