Bra004885

Description : M10-class (Matrixin) metalloprotease. EC_3.4 hydrolase acting on peptide bond (peptidase)

Gene families : OG0006358 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra004885
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_190

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031012	extracellular matrix	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006308	DNA catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002477	Peptidoglycan-bd-like	46	92
IPR001818	Pept_M10_metallopeptidase	131	292

External Links

No external refs found!

Bra004885

Expression Profile

Co-expression Networks

Functional Annotation