Bra004739 (ATPMEPCRD)

Aliases : ATPMEPCRD

Description : pectin methylesterase. EC_3.1 hydrolase acting on ester bond

Gene families : OG0010424 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra004739
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_299

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004620	phospholipase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004629	phospholipase C activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005199	structural constituent of cell wall	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	201	490
IPR006501	Pectinesterase_inhib_dom	31	159

External Links

No external refs found!