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- Species
- Lactuca sativa
- Sequence
- Lsat_1_v5_gn_2_111701.1
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Lsat_1_v5_gn_2_111701.1 (ALB1, PDE166, ALB-1V,...)
Aliases : ALB1, PDE166, ALB-1V, CHLD, V157
Description : EC_6.6 ligase forming nitrogen-metal bond. component *(CHLD) of magnesium-chelatase complex
Gene families : OG0004623 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004623_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type Description Actions Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_111701.1 Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_72
Expression Context Conservation (ECC)
Target Alias Description ECC score Gene Family Method Actions Spov3_chr1.00180 ALB1, PDE166,... EC_6.6 ligase forming nitrogen-metal bond. component... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Functional Annotation
Type GO Term Name Evidence Source MF GO:0000166 nucleotide binding None Extended MF GO:0003674 molecular_function None Extended MF GO:0005488 binding None Extended MF GO:0005524 ATP binding IEA Interproscan MF GO:0017076 purine nucleotide binding None Extended MF GO:0030554 adenyl nucleotide binding None Extended MF GO:0032553 ribonucleotide binding None Extended MF GO:0032555 purine ribonucleotide binding None Extended MF GO:0032559 adenyl ribonucleotide binding None Extended MF GO:0035639 purine ribonucleoside triphosphate binding None Extended MF GO:0036094 small molecule binding None Extended MF GO:0043167 ion binding None Extended MF GO:0043168 anion binding None Extended MF GO:0097159 organic cyclic compound binding None Extended MF GO:0097367 carbohydrate derivative binding None Extended MF GO:1901265 nucleoside phosphate binding None Extended MF GO:1901363 heterocyclic compound binding None Extended Type GO Term Name Evidence Source BP GO:0000413 protein peptidyl-prolyl isomerization IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0004019 adenylosuccinate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006694 steroid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006725 cellular aromatic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006778 porphyrin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0006807 nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0008152 metabolic process IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0008171 O-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0008202 steroid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0009058 biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0009073 aromatic amino acid family biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods CC GO:0009523 photosystem II IEP Lactuca Sativa GO terms from Neighborhoods CC GO:0009654 photosystem II oxygen evolving complex IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0015994 chlorophyll metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0015995 chlorophyll biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0016485 protein processing IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016831 carboxy-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016853 isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016872 intramolecular lyase activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016874 ligase activity IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0018130 heterocycle biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0018208 peptidyl-proline modification IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0019438 aromatic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods CC GO:0019898 extrinsic component of membrane IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0042440 pigment metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0044237 cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0044249 cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0044281 small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0046148 pigment biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0046483 heterocycle metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0051604 protein maturation IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0071586 CAAX-box protein processing IEP Lactuca Sativa GO terms from Neighborhoods BP GO:0071704 organic substance metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:1901360 organic cyclic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:1901362 organic cyclic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:1901564 organonitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:1901566 organonitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods BP GO:1901576 organic substance biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods CC GO:1990204 oxidoreductase complex IEP Lactuca Sativa GO terms from Neighborhoods External LinksNo external refs found! 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