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  5. Lsat_1_v5_gn_1_37881.1

Lsat_1_v5_gn_1_37881.1


Description : not classified


Gene families : OG0040406 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_37881.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_23


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008373 sialyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015689 molybdate ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030686 90S preribosome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030688 preribosome, small subunit precursor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009637 GPR107/GPR108-like 166 452
No external refs found!