Lsat_1_v5_gn_1_3320.1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group. 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene families : OG0000738 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_3320.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_42

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004000	adenosine deaminase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018208	peptidyl-proline modification	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019239	deaminase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051920	peroxiredoxin activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002480	DAHP_synth_2	68	504

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Lsat_1_v5_gn_1_3320.1

Expression Profile

Co-expression Networks

Functional Annotation