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  5. Bra040973

Bra040973 (ATU2AF65B, U2AF65b)


Aliases : ATU2AF65B, U2AF65b

Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex


Gene families : OG0001137 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra040973
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_231


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043531 ADP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 195 254
IPR000504 RRM_dom 59 128
No external refs found!