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  5. Bra040449

Bra040449 (ATNCED1, ATCCD1, CCD1, NCED1)


Aliases : ATNCED1, ATCCD1, CCD1, NCED1

Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase). carotenoid cleavage dioxygenase *(CCD1)


Gene families : OG0008382 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra040449
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_246


Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0003333 amino acid transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004096 catalase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005216 monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005986 sucrose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006544 glycine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006546 glycine catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009063 amino acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009071 serine family amino acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019203 carbohydrate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050308 sugar-phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0060590 ATPase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 47 493
No external refs found!