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  5. Bra038650

Bra038650


Description : mRNA helicase *(RH31)


Gene families : OG0004303 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra038650
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_138


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005761 mitochondrial ribosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006412 translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Brassica rapa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 268 445
IPR001650 Helicase_C 488 596
No external refs found!