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  5. Bra037325

Bra037325 (mCSF1)


Aliases : mCSF1

Description : mCSF mitochondrial RNA splicing factor


Gene families : OG0029144 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra037325
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_138


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0017053 transcription repressor complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034220 monoatomic ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098655 monoatomic cation transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 158 243
IPR001890 RNA-binding_CRM 279 361
No external refs found!