1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra037014

Bra037014 (SLOMO)


Aliases : SLOMO

Description : substrate adaptor *(FBL15) of SCF E3 ubiquitin ligase complex


Gene families : OG0003193 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra037014
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr4.03687 SLOMO substrate adaptor *(FBL15) of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004057 arginyl-tRNA--protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004652 obsolete polynucleotide adenylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004788 thiamine diphosphokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016598 protein arginylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030259 lipid glycosylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030975 thiamine binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042357 thiamine diphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042723 thiamine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043178 alcohol binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043631 obsolete RNA polyadenylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Brassica rapa GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 195 235
No external refs found!