Bra036257 (ICU13, AXR6, ATCUL1,...)

Aliases : ICU13, AXR6, ATCUL1, CUL1, ETA1

Description : component *(NQO2/24kDa) of NADH dehydrogenase electron input (module N). scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes

Gene families : OG0000750 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000750_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra036257
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_226

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005839	proteasome core complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006576	biogenic amine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006595	polyamine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006596	polyamine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006597	spermine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008215	spermine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008295	spermidine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009894	regulation of catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042176	regulation of protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042401	biogenic amine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001373	Cullin_N	22	641
IPR019559	Cullin_neddylation_domain	668	730

External Links

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Bra036257 (ICU13, AXR6, ATCUL1,...)

Expression Profile

Co-expression Networks

Functional Annotation