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  5. Bra035426

Bra035426 (AtMTR4, MTR4)


Aliases : AtMTR4, MTR4

Description : RNA helicase component *(MTR4) of TRAMP nucleolar regulation complex


Gene families : OG0004941 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra035426
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_37


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012961 Ski2/MTR4_C 445 615
IPR001650 Helicase_C 18 94
IPR025696 MTR4_beta-barrel 148 418
No external refs found!