Bra003397 (MTHFR1)

Aliases : MTHFR1

Description : 5,10-methylene-THF reductase. EC_1.5 oxidoreductase acting on CH-NH group of donor

Gene families : OG0001973 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001973_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra003397
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_265

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_7_3921.1	MTHFR1	EC_1.5 oxidoreductase acting on CH-NH group of donor....	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03904	MTHFR2	5,10-methylene-THF reductase. EC_1.5 oxidoreductase...	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	IEA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	None	Extended
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008172	S-methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008652	amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009086	methionine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003171	Mehydrof_redctse-like	6	301

External Links

No external refs found!

Bra003397 (MTHFR1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation