Bra033694 (KCS20)

Aliases : KCS20

Description : 3-ketoacyl-CoA synthase *(KCS)

Gene families : OG0002126 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002126_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra033694
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_81

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_3_123820.1	KCS20	3-ketoacyl-CoA synthase *(KCS)	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006073	obsolete cellular glucan metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030599	pectinesterase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046527	glucosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	412	492
IPR013601	FAE1_typ3_polyketide_synth	101	393

External Links

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Bra033694 (KCS20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation