Bra032931 (APSE)

Aliases : APSE

Description : beta-L-arabinopyranosidase *(APSE)

Gene families : OG0011474 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra032931
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_137

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004356	glutamine synthetase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006542	glutamine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006694	steroid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007031	peroxisome organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008202	steroid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016211	ammonia ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016229	steroid dehydrogenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051499	D-aminoacyl-tRNA deacylase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR010433	EIF-4B_pln	639	707
IPR002241	Glyco_hydro_27	213	388

External Links

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Bra032931 (APSE)

Expression Profile

Co-expression Networks

Functional Annotation