- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATUBC7, UBC7
Description : E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1 E3 ubiquitin ligase complex. component *(Ubc13) of Ubc13-Uev1 E2 ubiquitin-conjugating enzyme complex
Gene families : OG0002851 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002851_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra003210 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_201 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007034 | vacuolar transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008121 | ubiquinol-cytochrome-c reductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0009055 | electron transfer activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000608 | UBQ-conjugat_E2 | 10 | 159 |
| No external refs found! |