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  5. Bra031635

Bra031635


Description : not classified


Gene families : OG0028477 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031635
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_37


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005488 binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006189 'de novo' IMP biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072521 purine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 223 265
IPR002885 Pentatricopeptide_rpt 150 198
IPR002885 Pentatricopeptide_rpt 325 373
IPR002885 Pentatricopeptide_rpt 396 445
IPR002885 Pentatricopeptide_rpt 119 147
IPR002885 Pentatricopeptide_rpt 469 499
IPR002885 Pentatricopeptide_rpt 287 310
No external refs found!