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  5. Bra031286

Bra031286


Description : homologous recombination repair factor *(MDC1)


Gene families : OG0020805 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031286
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007088 regulation of mitotic nuclear division IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007346 regulation of mitotic cell cycle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008199 ferric iron binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010564 regulation of cell cycle process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010639 negative regulation of organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010948 negative regulation of cell cycle process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030623 U5 snRNA binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033044 regulation of chromosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045786 negative regulation of cell cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051783 regulation of nuclear division IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051983 regulation of chromosome segregation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901987 regulation of cell cycle phase transition IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901988 negative regulation of cell cycle phase transition IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:1903047 mitotic cell cycle process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Brassica rapa GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Brassica rapa GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001357 BRCT_dom 745 827
No external refs found!