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  5. Bra030242

Bra030242 (TRM4B, AtTRM4b)


Aliases : TRM4B, AtTRM4b

Description : tRNA cytidine-methyltransferase *(TRM4). EC_2.1 transferase transferring one-carbon group


Gene families : OG0004913 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra030242
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_165


Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001727 lipid kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004143 ATP-dependent diacylglycerol kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 175 354
No external refs found!