Bra029700 (iPGAM2)

Aliases : iPGAM2

Description : EC_5.4 intramolecular transferase

Gene families : OG0010472 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra029700
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_141

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0004619	phosphoglycerate mutase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006007	glucose catabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019320	hexose catabolic process	None	Extended
MF	GO:0030145	manganese ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046365	monosaccharide catabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003684	damaged DNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005049	nuclear export signal receptor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006289	nucleotide-excision repair	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006465	signal peptide processing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009060	aerobic respiration	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010498	proteasomal protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010564	regulation of cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010639	negative regulation of organelle organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010948	negative regulation of cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031577	spindle checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033044	regulation of chromosome organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0044391	ribosomal subunit	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0045275	respiratory chain complex III	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045333	cellular respiration	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045786	negative regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051783	regulation of nuclear division	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051784	negative regulation of nuclear division	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051983	regulation of chromosome segregation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051985	negative regulation of chromosome segregation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071173	spindle assembly checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071174	mitotic spindle checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1902495	transmembrane transporter complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1905818	regulation of chromosome separation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1905819	negative regulation of chromosome separation	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1990351	transporter complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:2001251	negative regulation of chromosome organization	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011258	BPG-indep_PGM_N	103	323
IPR006124	Metalloenzyme	21	544

External Links

No external refs found!

Bra029700 (iPGAM2)

Expression Profile

Co-expression Networks

Functional Annotation