- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PDF2
Description : HD-ZIP IV-type transcription factor
Gene families : OG0001960 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001960_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra029527 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_39 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0008289 | lipid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006629 | lipid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007010 | cytoskeleton organization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009605 | response to external stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009606 | tropism | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010274 | hydrotropism | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016746 | acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| No external refs found! |