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Aliases : Tudor2, AtTudor2, TSN2
Description : mRNA endoribonuclease *(TSN)
Gene families : OG0002923 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002923_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra029309 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_272 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016459 | myosin complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002999 | Tudor | 1067 | 1190 |
| IPR016071 | Staphylococal_nuclease_OB-fold | 1197 | 1302 |
| IPR016071 | Staphylococal_nuclease_OB-fold | 384 | 494 |
| IPR016071 | Staphylococal_nuclease_OB-fold | 754 | 887 |
| IPR016071 | Staphylococal_nuclease_OB-fold | 614 | 708 |
| IPR016071 | Staphylococal_nuclease_OB-fold | 950 | 1047 |
| No external refs found! |