Bra029170


Description : pectin methylesterase. EC_3.1 hydrolase acting on ester bond


Gene families : OG0004440 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004440_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra029170
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Bra022552 No alias pectin methylesterase 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 212 512
IPR006501 Pectinesterase_inhib_dom 28 172
No external refs found!