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  5. Bra025293

Bra025293


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex


Gene families : OG0012973 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra025293
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_189


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005664 nuclear origin of replication recognition complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048478 obsolete replication fork protection IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 310 345
IPR001680 WD40_rpt 269 300
IPR001680 WD40_rpt 141 179
IPR001680 WD40_rpt 356 390
IPR001680 WD40_rpt 103 136
No external refs found!