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  5. Bra024476

Bra024476 (SYP112, ATSYP112)


Aliases : SYP112, ATSYP112

Description : Qa-type SYP1-group component of SNARE membrane fusion complex


Gene families : OG0013086 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra024476
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_26


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 42 226
IPR000727 T_SNARE_dom 229 277
No external refs found!