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Aliases : AtPDS5C, PDS5C
Description : cohesin cofactor *(PDS5)
Gene families : OG0008056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra023975 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000105 | histidine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004175 | endopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006547 | histidine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007093 | mitotic cell cycle checkpoint signaling | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007094 | mitotic spindle assembly checkpoint signaling | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008237 | metallopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017070 | U6 snRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022402 | cell cycle process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030623 | U5 snRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031267 | small GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031577 | spindle checkpoint signaling | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033043 | regulation of organelle organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033046 | negative regulation of sister chromatid segregation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033048 | negative regulation of mitotic sister chromatid segregation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045839 | negative regulation of mitotic nuclear division | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045841 | negative regulation of mitotic metaphase/anaphase transition | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045930 | negative regulation of mitotic cell cycle | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051020 | GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051783 | regulation of nuclear division | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051784 | negative regulation of nuclear division | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051985 | negative regulation of chromosome segregation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071173 | spindle assembly checkpoint signaling | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071174 | mitotic spindle checkpoint signaling | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901991 | negative regulation of mitotic cell cycle phase transition | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902100 | negative regulation of metaphase/anaphase transition of cell cycle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1905819 | negative regulation of chromosome separation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:2000816 | negative regulation of mitotic sister chromatid separation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Brassica rapa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |