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Aliases : AtTPR7, TPR7, OEP61
Description : regulatory E3 ubiquitin ligase *(RHF). accessory component *(TPR7) of co-translational insertion system
Gene families : OG0000910 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra002382 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003779 | actin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004175 | endopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004356 | glutamine synthetase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004474 | malate synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006097 | glyoxylate cycle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006259 | DNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006284 | base-excision repair | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006974 | DNA damage response | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008237 | metallopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008285 | negative regulation of cell population proliferation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009056 | catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019842 | vitamin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030127 | COPII vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033554 | cellular response to stress | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0040008 | regulation of growth | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042127 | regulation of cell population proliferation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043248 | proteasome assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045927 | positive regulation of growth | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046487 | glyoxylate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048518 | positive regulation of biological process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051716 | cellular response to stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0110154 | RNA decapping | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0110156 | methylguanosine-cap decapping | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901575 | organic substance catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 627 | 668 |
| No external refs found! |