Bra023689 (CHR17)


Aliases : CHR17

Description : ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes


Gene families : OG0001520 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra023689
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_189


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006338 chromatin remodeling IEA Interproscan
MF GO:0031491 nucleosome binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005664 nuclear origin of replication recognition complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006270 DNA replication initiation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010639 negative regulation of organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032780 negative regulation of ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033044 regulation of chromosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042555 MCM complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043086 negative regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043462 regulation of ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048478 obsolete replication fork protection IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051095 regulation of helicase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051097 negative regulation of helicase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905462 regulation of DNA duplex unwinding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905774 regulation of DNA helicase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905775 negative regulation of DNA helicase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001650 Helicase_C 488 600
IPR015195 SLIDE 884 994
IPR015194 ISWI_HAND-dom 750 813
IPR000330 SNF2_N 216 483
No external refs found!