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  5. Bra022700

Bra022700 (ATOMT1, OMT1, OMT3,...)


Aliases : ATOMT1, OMT1, OMT3, AtCOMT, COMT1

Description : caffeic acid O-methyltransferase *(COMT). EC_2.1 transferase transferring one-carbon group


Gene families : OG0001556 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022700
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_38


Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019915 lipid storage IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012967 Plant_MeTrfase_dimerisation 33 82
IPR001077 O_MeTrfase_dom 133 340
No external refs found!